ZenML VS Flyte VS Metaflow
Comparing ZenML, Flyte, and Metaflow: Choosing the Right Workflow Orchestration Tool for Your ML Pipelines
January 15, 2025Introduction
Pipeline sprawl is real. As the complexity of models grows, there's a need for scalable ML pipelines.
As a refresher, ML pipelines are a series of interconnected steps that involve building, training, evaluating, and deploying machine learning models.
In a typical ML pipeline, you'll go through steps like preparing data, ingesting data, training the model, validating and evaluating it, deploying, and eventually monitoring it. Keeping all these parts running smoothly is key to making sure your ML project can scale and stay manageable once it’s in prod.
Building and managing ML pipelines can be tricky, and it requires many steps and tools. This is where platforms like ZenML, Flyte, and Metaflow come in, making it easier to handle the complexity.
In this article, we’ll explore ZenML, Flyte, and Metaflow and compare how they help us build and manage ML pipelines, their features, benefits, and use cases so that you can decide what tool is right for your project.
On benefits of ML workflow and pipeline orchestration tools
ML workflow and pipeline orchestration tools are essential for building and maintaining ML pipelines. The right pipeline tool can help your team collaborate more seamlessly and build scalable pipelines: manage lifecycle, automate tasks, and monitor performance.
The following are some of the benefits of pipeline tools:
- Task automation - Pipeline orchestration tools can help automate repetitive tasks so that your team focuses more on important things - speeding up the development process.
- Scalability - ML workflows usually involve large datasets, complex models, and computationally intensive processes. These tools can help ensure that your pipeline scales by distributing resources across various computing environments.
- Dependency Management - It is important to properly handle the dependencies (e.g data, model, feature, infrastructure, and code dependencies) in your ML workflow for efficiency. Orchestration tools can help automate the resolution of task dependencies and speed up your overall workflow.
- Pipeline Monitoring - Pipeline tools can track the performance and health of your models in real time and alerts you when your model’s performance deteriorates. This way, you and your team are proactive - addressing problems before they escalate.
- Reproducibility - Orchestration tools can track every component of your workflow to ensure reproducibility in your experiments. Reproducibility makes debugging, auditing, and collaboration within your team better.
- Ensuring Consistency Across Environments - Pipeline tools ensure consistent behavior in your pipeline across different environments (local, cloud, on-premise) so that your models have stable and predictable performance.
> Organizations often struggle to choose the right tool for their ML pipeline. This is probably because they do not have full knowledge of how these tools work, where they shine the most, and their features. Having this knowledge can help you decide on what tool is right for your use case.
ZenML: A modular approach to ML pipelines
ZenML is an open-source, extensible MLOps framework that helps you build and deploy machine learning pipelines better. Its decoupled architecture makes it a great choice for organizations building scalable and reusable ML pipelines. ZenML’s extensible nature allows it integrate seamlessly with your favorite tools - Kubeflow, Kubernetes, MLflow, and Skypilot.
On concepts and architecture
At the core of ZenML are various concepts such as steps, pipelines, artifacts, and materializers.
(Image from ZenML Docs)
- Steps - are individual components of a pipeline where each step represents a specific task in the ML workflow. Steps are defined as functions. Data can pass from one step to another and because each step is versioned, each pipeline run has a consistent and reproducible result.
- Pipelines - are a series of connected steps that define your workflow. Like steps, pipelines are defined using Python decorators or classes. Pipelines and steps house your core business logic, so you typically would spend time defining them.
- Artifacts - are the input and output data that go through your steps. Materializers are responsible for serializing and deserializing artifacts.
Let’s combine the concepts above and see what ZenML code looks like
Key features:
- Modularity - ZenML is both decoupled and modular. You can break down your workflows into smaller reusable components or even plug other tools into your pipeline. Because its infrastructure is decoupled, your team can collaborate more effectively.
- Extensibility - ZenML is highly extensible. You can customize it extensively for your specific use case and integrate your preferred tools to it.
- Flexibility - It can run on popular cloud platforms like AWS, GCP, and Azure. It also supports other ML tools - Orchestrators (e.g. Airflow, Kubeflow), experiment trackers (e.g. MLflows), data validators, and model deployers.
- Pipeline Orchestration - It provides features like version control, monitoring, and scheduling for managing your machine learning pipeline throughout its entire lifecycle .
- Reproducibility - Track and compare the performance of different experiments and versions.
You can read more on ZenML system architecture here.
Flyte: scalable and reliable ML pipelines
Flyte is an open-source workflow orchestrator designed for building ML pipelines at scale. Its architecture makes it more suitable for managing large, complex pipelines (petabytes of data). Scalability and reliability are its core. It is designed to handle changing workloads and resources.
Flyte also allows easy data movement between local and cloud with a built-in visualization feature to monitor data and artifacts.
On concepts and architecture
Flyte’s distributed architecture (also called component architecture) allows it to efficiently run large-scale workflows across various environments. These components are separated into three (3) planes: user plane, control plane, and data plane
(Image from Flyte Docs)
The user plane provides the tools to manage and visualize your workflows in an easy to understand format.
By default, workflows are represented as Directed Acyclic Graphs (DAGs), and managing workflows in this format is difficult so Flyte provides built-in tools to convert workflows to a format less tedious for humans to manage. At the control plane, information is stored and retrieved. This plane manages workflow orchestration and scheduling.
At the data plane, the requests received from the control plane are executed. Status requests are then sent back to the control plane for storage and onward transmission to end users. The separation of these components and task parallelization allows Flyte to handle resource-intensive workflows at scale.
Additionally, Flyte components communicate effectively by having a shared understanding of the structure of their entities - Workflows, Tasks, and Schedules.
Here is an example Flyte code:
Tasks are the foundation building blocks of your workflow. Each task operates within its own container. Workflow links multiple tasks together. Tasks and Workflows are synonymous with Steps and Pipelines in ZenML.
Let’s examine some of Flyte's key features.
Key features
- Reliability and Fault Tolerance - Flyte provides a workflow resilient to failure and interruptions. Its automatic retry mechanism makes your pipeline reliable - automatically retry a failed task using predefined retry policies. Flyte knows to rerun only failed tasks and not the entire pipeline, saving time and resources. Flyte uses component architecture - there’s no worrying about your entire workflow failing because one task failed.
- Dynamic Workflows - Flyte gives you the flexibility to create workflows that can change and evolve based on demand. This way, your pipeline can respond to changing requirements.
- Multi-Tenancy - Flyte’s architecture is multi-tenant. Different users can share the same platform without mixing up data and configurations, allowing you to organize resources and collaborate better.
- Declarative Pipelines - Define your workflows declaratively - separate logic and execution. It makes it easy to build, test, and scale your workflows.
- Versioned Workflow - Reproduce results and roll back changes as needed. Flyte versions your workflows, allowing you to isolate experiments and switch versions when needed.
- Visualization and Monitoring - Visualize your data and monitor the performance of your models.
You can read more on Flyte component architecture here.
Metaflow: A simplified approach to ML pipelines
Metaflow takes a refreshingly simple approach to ML pipelines. Originally built at Netflix, it strips away all the infra complexities that usually come with ML workflow management.
Think of it as your friendly neighborhood ML tool that grows with you - from quick laptop experiments all the way to serious production deployments.
(Image from Metaflow Docs)
What's nice about Metaflow is that while other tools might overwhelm you with configurations and setups, it focuses on letting you do actual data science work. Yay, the workflow structure is a bit rigid, but it plays nicely with all the popular tools you'd expect - Kubernetes, Apache Airflow, AWS Batch, Azure, and GCP.
On structure and concepts
The Metaflow structure follows the dataflow paradigm for machine learning pipelines.
The structure involves key components like Steps, Flows, and Branching. Just like in ZenML and Flyte, Steps are the defined operations (or unit of execution) such as data loading, preprocessing, and training. Flows determine how data moves from one step to another.
(Image from Metaflow Docs)
Metaflow allows parallel execution of steps. This is known as branching. You can execute each branch over multiple cloud instances.
Data is automatically tracked as artifacts across different steps of the pipeline. This simplifies the passing of data between steps. Since artifacts are versioned and stored, you can also reproduce experiments and debug your pipeline easily.
Let’s take a look at a sample Metaflow code.
Key features
Below are some critical features in Metaflow:
- Simplicity - Metaflow has a simplistic design, making it easy to learn and use even for those new to ML engineering.
- Scalability and Distributed Execution - Metaflow’s distributed execution allows it to handle large datasets at scale, run tasks in parallel, and use cloud resources efficiently.
- Integration - It operates an opinionated workflow structure. However, it supports popular tools and cloud platforms.
- Workflow Management - You can manage workflow and orchestrate your pipeline easily with Metaflow.
- Reproducibility - Steps in Metaflow are versioned, so you can always reproduce previous experiments, and track and compare results.
You can read more on Metaflow architecture here.
On ZenML vs. Flyte vs. Metaflow - feature-to-feature comparison
Next, let’s compare each of these tools.
Modularity and Reusability
- ZenML is designed with modularity, allowing you to reuse components in your workflow. This makes your workflow customizable and composable.
- Flyte has a modular workflow structure with a strict type system to ensure task compatibility.
- Metaflow provides a modular structure with its function-based step pipeline. However, if your pipeline is complex with interchangeable components, it may require more manual configurations.
Scalability and Performance
- ZenML scales effortlessly well for medium-sized pipelines. If your pipeline has large-scale workloads, ZenML will rely on the scalability of underlying services like AWS Batch and Kubernetes.
- Flyte was designed for scalability. It can handle massive workloads without any hindrance to performance due to its distributed architecture.
- Metaflow, not as distributed as Flyte, can also handle large workloads but extra manual configurations are needed.
Integration With Popular Tools
- ZenML’s Stack concept lets you easily integrate your favorite tool into your pipeline. It integrates seamlessly with popular tools.
- Flyte has better support for cloud-native integrations.
- Metaflow is more opinionated making integration less broad than ZenML’s.
Extensibility
- ZenML is highly extensible. You can customize components and integrate your preferred tools with it. Its extensibility makes it suitable for your various MLOps needs.
- Flyte is extensible through plugins and custom workflows. However, extending its Kubernetes-native approach requires more technical knowledge.
- Metaflow also offers some customization options but are less extensible than ZenML and Flyte.
Workflow scheduling and Task orchestration
- ZenML relies on external tools like Kubeflow for task scheduling. It doesn’t have a built-in orchestrator but allows you to plugin any orchestrator of your choice. While this makes orchestration flexible, it also creates dependence on third-party tools.
- Flyte has a built-in workflow scheduling and retry mechanism. It is a fully-featured orchestration tool.
- Metaflow provides basic workflow management and orchestration out of the box. It lacks advanced orchestration like dynamic scheduling and prioritization found in Flyte.
Ease of use and Learning curve
- ZenML prioritizes simplicity and ease of use. It has clear documentation to get you started.
- Flyte may be more complex for beginners due to its Kubernetes-native architecture.
- Metaflow is designed for simplicity—easy to use and user-friendly CLI. Teams who are not experienced with orchestration can still get things done.
Community support
- ZenML has an active and growing community with a support channel on Slack. Although this framework is still relatively young, it has an engaging community around it.
- Flyte has a strong community and active contributors from large organizations.
- Metaflow has a large active community of users.
What the Community Thinks
Here’s what practitioners in the MLOps Community are saying about these tools:
ZenML:
- Practitioners appreciate its modularity, enabling separation of components like trainer modules from concrete solutions (e.g., SageMaker).
- Some note challenges like a lack of monitoring/observability (on the roadmap) and constraints caused by tool-agnosticism in specific setups.
- The founder emphasizes ZenML's strength in enabling seamless switching between orchestration tools and staying close to platform-agnostic principles.
Flyte:
- Proven at Scale - Flyte powers over 1M pipelines monthly at Lyft, ensuring reliability and scalability.
- Developer-Friendly - Supports Python/Java with Flytekit, used by Lyft, Spotify, and more.
- Seamless Integration - Simplifies workflows with SageMaker and ensures full reproducibility.
Metaflow:
- Easy Local-to-Production Workflow - Add flags/decorators to switch seamlessly.
- Great for Heavy ML Workloads - Handles deep learning efficiently; minor tweaks for massive datasets.
- Setup Challenges - Initial setup with Argo workflows requires customization.
On deciding the right tool for your ‘Use Case’
Your project requirements, engineering team experience and infra preferences are some of the key factors that determine the right tool for your ML pipeline. Other key factors are:
- Pipeline complexity - If you have a complex pipeline, you must consider ML tools built to handle large workloads effortlessly. Flyte is scalable by design making it a strong choice when dealing with a highly complex pipeline.
- Modularity and Reusability - If your team is looking to build portable pipelines with reusable components, you should consider ZenML. ZenML’s modular approach makes it ideal for this.
- Integration With Your Existing Tools - You should consider the integration capabilities of each tool with your existing infrastructure. ZenML is a strong choice when it comes to easy integration with existing tools.
- Learning Curve - Consider your team’s experience when choosing a pipeline tool. Tools like Flyte require experienced hands as such may not be a great choice for you if you have less experienced hands on your team.
- Community and Support - It is a good practice to choose a tool with an active community so as to get timely support when you encounter issues.
Who wins?
Well, the answer is what an engineering team actually needs. Each of these frameworks shines in its own way, much like how different programming languages suit different projects in software engineering.
ZenML speaks to teams who want maximum flexibility in their ML pipeline setup. If you enjoy customizing your workflow and swapping tools in and out without hassle, this modular approach could be your best fit.
Flyte resonates with teams handling complex, large-scale workflows if you're running production-grade workloads where reliability and built-in versioning matter, its robust architecture could be what you need.
Metaflow straightforward approach makes perfect sense when you want to focus more on the ML work itself rather than infrastructure complexities. If you want to iterate quickly with minimal setup, its simplicity could be your ally.
When choosing, consider your team's experience, project scale, and infra needs.
> The best tool is simply the one that helps your team work most effectively together.
Further reading
This blog provided a basic overview and comparison of ML pipeline orchestration tools.
For more functionality and detais, check out the official docs: